Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm17208-201ENSMUST00000168388 535 ntBASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.08□□□□□ -0.48
Rnf111Q99ML9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.08□□□□□ -0.48
Rnf111Q99ML9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.08□□□□□ -0.48
Rnf111Q99ML9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm20614-201ENSMUST00000177106 632 ntBASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm37042-201ENSMUST00000193816 581 ntBASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm35960-201ENSMUST00000202712 767 ntBASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm6266-201ENSMUST00000203844 806 ntBASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.07□□□□□ -0.48
Rnf111Q99ML9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf111Q99ML9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.06□□□□□ -0.48
Rnf111Q99ML9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms