Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.8□□□□□ -0.52
Chmp1b1Q99LU0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Gm13226-201ENSMUST00000117838 404 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Gm29127-201ENSMUST00000188304 517 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.79□□□□□ -0.52
Chmp1b1Q99LU0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm12363-201ENSMUST00000122250 668 ntBASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp1b1Q99LU0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms