Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Gm27892-201ENSMUST00000185017 106 ntBASIC11.35□□□□□ -0.59
Lims1Q99JW4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lims1Q99JW4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.34□□□□□ -0.59
Lims1Q99JW4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Gm17150-201ENSMUST00000165577 381 ntBASIC11.34□□□□□ -0.59
Lims1Q99JW4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Gm4034-201ENSMUST00000187674 480 ntBASIC11.34□□□□□ -0.59
Lims1Q99JW4 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.34□□□□□ -0.59
Lims1Q99JW4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lims1Q99JW4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Lims1Q99JW4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Lims1Q99JW4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Lims1Q99JW4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Lims1Q99JW4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Gm13315-201ENSMUST00000120376 991 ntBASIC11.33□□□□□ -0.6
Lims1Q99JW4 Gm24644-201ENSMUST00000157114 139 ntBASIC11.33□□□□□ -0.6
Lims1Q99JW4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Lims1Q99JW4 Gm18304-201ENSMUST00000189162 546 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms