Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Gm8515-201ENSMUST00000194852 576 ntBASIC12.18□□□□□ -0.46
Smim11aQ99J19 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Gm19163-201ENSMUST00000223313 780 ntBASIC12.18□□□□□ -0.46
Smim11aQ99J19 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.18□□□□□ -0.46
Smim11aQ99J19 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smim11aQ99J19 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.17□□□□□ -0.46
Smim11aQ99J19 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.17□□□□□ -0.46
Smim11aQ99J19 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Gm32025-201ENSMUST00000217960 307 ntBASIC12.17□□□□□ -0.46
Smim11aQ99J19 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.17□□□□□ -0.46
Smim11aQ99J19 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.17□□□□□ -0.46
Smim11aQ99J19 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Gm10012-201ENSMUST00000078252 192 ntBASIC12.17□□□□□ -0.46
Smim11aQ99J19 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Smim11aQ99J19 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.16□□□□□ -0.46
Smim11aQ99J19 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smim11aQ99J19 Gm11918-201ENSMUST00000121660 179 ntBASIC12.16□□□□□ -0.46
Smim11aQ99J19 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms