Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm13297-201ENSMUST00000120205 934 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm45925-201ENSMUST00000218882 744 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm22058-201ENSMUST00000083393 310 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdha3Q91Y16 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdha3Q91Y16 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Gm44364-201ENSMUST00000198368 141 ntBASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms