Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb1Q91Y08 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Gm10434-201ENSMUST00000101158 471 ntBASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 AY702102-202ENSMUST00000194651 1173 ntBASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Gm19309-201ENSMUST00000218295 205 ntBASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb1Q91Y08 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gm37201-201ENSMUST00000191845 523 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gm38002-201ENSMUST00000193255 180 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb1Q91Y08 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Gm13875-201ENSMUST00000120162 282 ntBASIC12.9□□□□□ -0.34
Pcdhb1Q91Y08 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms