Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb3Q91XZ7 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm27701-201ENSMUST00000184498 110 ntBASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb3Q91XZ7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm38280-201ENSMUST00000192610 158 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm42474-201ENSMUST00000201073 505 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm43906-201ENSMUST00000203194 906 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 AC153968.2-201ENSMUST00000215579 1140 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb3Q91XZ7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms