Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm6091-201ENSMUST00000098307 165 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb4Q91XZ6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Gm29649-201ENSMUST00000185649 419 ntBASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb4Q91XZ6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb4Q91XZ6 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms