Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb8Q91XZ2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb8Q91XZ2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb8Q91XZ2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb8Q91XZ2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb8Q91XZ2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb8Q91XZ2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Gm12502-201ENSMUST00000120197 444 ntBASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Gm25927-201ENSMUST00000175058 117 ntBASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Gm27731-201ENSMUST00000185192 107 ntBASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb8Q91XZ2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Gm6222-202ENSMUST00000182143 629 ntBASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Gm5745-201ENSMUST00000183748 313 ntBASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb8Q91XZ2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Daam2-202ENSMUST00000224595 1926 ntBASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb8Q91XZ2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms