Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx41Q91VN6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm13492-201ENSMUST00000119772 665 ntBASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm37466-201ENSMUST00000195692 652 ntBASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx41Q91VN6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm25214-201ENSMUST00000104573 129 ntBASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm13875-201ENSMUST00000120162 282 ntBASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm31256-201ENSMUST00000194705 506 ntBASIC14.29□□□□□ -0.12
Ddx41Q91VN6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.29□□□□□ -0.12
Ddx41Q91VN6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms