Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm14350-201ENSMUST00000116642 640 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm9522-201ENSMUST00000182394 926 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.7□□□□□ -0.7
Tram1Q91V04 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Tram1Q91V04 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Tram1Q91V04 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tram1Q91V04 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.69□□□□□ -0.7
Tram1Q91V04 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.69□□□□□ -0.7
Tram1Q91V04 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.69□□□□□ -0.7
Tram1Q91V04 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.69□□□□□ -0.7
Tram1Q91V04 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
Tram1Q91V04 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.69□□□□□ -0.7
Tram1Q91V04 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Tram1Q91V04 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tram1Q91V04 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms