Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mir5120-201ENSMUST00000175020 78 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Mir5132-201ENSMUST00000175166 71 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Gm17812-201ENSMUST00000204935 318 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Gm45224-201ENSMUST00000208203 414 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.31□□□□□ -0.28
TraipQ8VIG6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.31□□□□□ -0.28
TraipQ8VIG6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TraipQ8VIG6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm12217-201ENSMUST00000118858 696 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm13438-201ENSMUST00000120100 573 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm12266-201ENSMUST00000120311 962 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm24749-201ENSMUST00000157838 343 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm17040-202ENSMUST00000170597 889 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TraipQ8VIG6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.3□□□□□ -0.28
TraipQ8VIG6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TraipQ8VIG6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 378.5 ms