Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Gm38092-201ENSMUST00000195600 653 ntBASIC12.87□□□□□ -0.35
Trim60Q8VI40 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim60Q8VI40 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.86□□□□□ -0.35
Trim60Q8VI40 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.86□□□□□ -0.35
Trim60Q8VI40 Gm12363-201ENSMUST00000122250 668 ntBASIC12.86□□□□□ -0.35
Trim60Q8VI40 Gm24644-201ENSMUST00000157114 139 ntBASIC12.86□□□□□ -0.35
Trim60Q8VI40 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Gm44882-201ENSMUST00000205702 802 ntBASIC12.86□□□□□ -0.35
Trim60Q8VI40 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.86□□□□□ -0.35
Trim60Q8VI40 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.86□□□□□ -0.35
Trim60Q8VI40 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim60Q8VI40 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.85□□□□□ -0.35
Trim60Q8VI40 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Gm15806-201ENSMUST00000120696 955 ntBASIC12.85□□□□□ -0.35
Trim60Q8VI40 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Gm8652-201ENSMUST00000181363 964 ntBASIC12.85□□□□□ -0.35
Trim60Q8VI40 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.85□□□□□ -0.35
Trim60Q8VI40 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.85□□□□□ -0.35
Trim60Q8VI40 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms