Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Gm7003-201ENSMUST00000195089 312 ntBASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx39aQ8VDW0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Gm23200-201ENSMUST00000104379 132 ntBASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Gm9083-201ENSMUST00000120423 819 ntBASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Gm9996-201ENSMUST00000070359 913 ntBASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx39aQ8VDW0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Gm14644-201ENSMUST00000116671 647 ntBASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Gm19187-201ENSMUST00000206781 892 ntBASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ddx39aQ8VDW0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms