Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.13□□□□□ -0.47
Q8VDP2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.13□□□□□ -0.47
Q8VDP2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.13□□□□□ -0.47
Q8VDP2 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.13□□□□□ -0.47
Q8VDP2 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.13□□□□□ -0.47
Q8VDP2 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.13□□□□□ -0.47
Q8VDP2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Q8VDP2 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Q8VDP2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Q8VDP2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Q8VDP2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Q8VDP2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC12.12□□□□□ -0.47
Q8VDP2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Gm25287-201ENSMUST00000103846 110 ntBASIC12.12□□□□□ -0.47
Q8VDP2 Gm22918-201ENSMUST00000103855 110 ntBASIC12.12□□□□□ -0.47
Q8VDP2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.12□□□□□ -0.47
Q8VDP2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.12□□□□□ -0.47
Q8VDP2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Gm20553-201ENSMUST00000204205 844 ntBASIC12.12□□□□□ -0.47
Q8VDP2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Q8VDP2 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Q8VDP2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Q8VDP2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Q8VDP2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q8VDP2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.11□□□□□ -0.47
Q8VDP2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Q8VDP2 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.11□□□□□ -0.47
Q8VDP2 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Mir449b-201ENSMUST00000104833 80 ntBASIC12.11□□□□□ -0.47
Q8VDP2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.11□□□□□ -0.47
Q8VDP2 Gm25948-201ENSMUST00000175334 112 ntBASIC12.11□□□□□ -0.47
Q8VDP2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.11□□□□□ -0.47
Q8VDP2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Q8VDP2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Q8VDP2 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Q8VDP2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Q8VDP2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Q8VDP2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms