Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Gm9022-201ENSMUST00000182482 992 ntBASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Gm27243-201ENSMUST00000183964 521 ntBASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Gm29649-201ENSMUST00000185649 419 ntBASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Gm42599-201ENSMUST00000201308 469 ntBASIC11.95□□□□□ -0.5
Lsm1Q8VC85 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm11597-201ENSMUST00000121423 964 ntBASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm27682-201ENSMUST00000183930 110 ntBASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm10268-201ENSMUST00000085340 555 ntBASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm1Q8VC85 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Gm16177-201ENSMUST00000120728 718 ntBASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Gm29127-201ENSMUST00000188304 517 ntBASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lsm1Q8VC85 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.93□□□□□ -0.5
Lsm1Q8VC85 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms