Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Gm8566-201ENSMUST00000120174 465 ntBASIC14.36□□□□□ -0.11
Usp33Q8R5K2 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.36□□□□□ -0.11
Usp33Q8R5K2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp33Q8R5K2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Gm12208-201ENSMUST00000122004 163 ntBASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Rmrp-201ENSMUST00000157463 271 ntBASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.35□□□□□ -0.11
Usp33Q8R5K2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.35□□□□□ -0.11
Usp33Q8R5K2 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.35□□□□□ -0.11
Usp33Q8R5K2 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Usp33Q8R5K2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.35□□□□□ -0.11
Usp33Q8R5K2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Gm13045-201ENSMUST00000119019 712 ntBASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Gm11667-201ENSMUST00000119828 486 ntBASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Gm5616-201ENSMUST00000165252 384 ntBASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Gm8741-201ENSMUST00000174736 384 ntBASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp33Q8R5K2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp33Q8R5K2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp33Q8R5K2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp33Q8R5K2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp33Q8R5K2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp33Q8R5K2 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.33□□□□□ -0.12
Usp33Q8R5K2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp33Q8R5K2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp33Q8R5K2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp33Q8R5K2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp33Q8R5K2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms