Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gm7467-201ENSMUST00000185173 652 ntBASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gm37835-201ENSMUST00000193305 361 ntBASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gm45770-201ENSMUST00000212105 616 ntBASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp7Q8R1T1 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm12165-201ENSMUST00000117047 342 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm11941-201ENSMUST00000119904 610 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm14760-201ENSMUST00000121831 999 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm25881-201ENSMUST00000157783 103 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm43184-201ENSMUST00000197247 542 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp7Q8R1T1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm23251-201ENSMUST00000103773 110 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm23596-201ENSMUST00000104304 132 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm12196-201ENSMUST00000120954 262 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm26035-201ENSMUST00000083065 308 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp7Q8R1T1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp7Q8R1T1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms