Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
H2afjQ8R1M2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Gm15806-201ENSMUST00000120696 955 ntBASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Proscos-202ENSMUST00000178990 666 ntBASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Gm27486-201ENSMUST00000184923 80 ntBASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.56□□□□□ -0.56
H2afjQ8R1M2 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
H2afjQ8R1M2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm14921-201ENSMUST00000118643 908 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm13369-201ENSMUST00000119442 987 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm13123-201ENSMUST00000122173 492 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm17208-201ENSMUST00000168388 535 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm8810-201ENSMUST00000172895 754 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm8598-201ENSMUST00000221184 836 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Mir339-201ENSMUST00000083659 96 ntBASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
H2afjQ8R1M2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms