Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm27023-201ENSMUST00000182372 285 ntBASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Gm14723-201ENSMUST00000118686 215 ntBASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Gm6007-201ENSMUST00000208170 823 ntBASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sf3a1Q8K4Z5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm11222-201ENSMUST00000119005 738 ntBASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm13570-201ENSMUST00000140763 309 ntBASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm21769-201ENSMUST00000211922 111 ntBASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sf3a1Q8K4Z5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Gm30285-201ENSMUST00000214614 422 ntBASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Gm24136-201ENSMUST00000083374 165 ntBASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms