Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Scamp1Q8K021 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scamp1Q8K021 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gm14109-201ENSMUST00000118814 309 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gm2260-201ENSMUST00000184965 657 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.22□□□□□ -0.45
Scamp1Q8K021 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scamp1Q8K021 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Gm14208-201ENSMUST00000119645 678 ntBASIC12.21□□□□□ -0.45
Scamp1Q8K021 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.21□□□□□ -0.45
Scamp1Q8K021 Gm14277-201ENSMUST00000121195 360 ntBASIC12.21□□□□□ -0.45
Scamp1Q8K021 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Gm24990-201ENSMUST00000157406 323 ntBASIC12.21□□□□□ -0.45
Scamp1Q8K021 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scamp1Q8K021 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.21□□□□□ -0.46
Scamp1Q8K021 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scamp1Q8K021 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms