Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne4Q8CII8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Gm26286-201ENSMUST00000104166 134 ntBASIC14.03□□□□□ -0.16
Syne4Q8CII8 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Gm11246-201ENSMUST00000120880 345 ntBASIC14.03□□□□□ -0.16
Syne4Q8CII8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.03□□□□□ -0.16
Syne4Q8CII8 Gm23153-201ENSMUST00000175323 313 ntBASIC14.03□□□□□ -0.16
Syne4Q8CII8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.03□□□□□ -0.16
Syne4Q8CII8 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.03□□□□□ -0.16
Syne4Q8CII8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.03□□□□□ -0.16
Syne4Q8CII8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne4Q8CII8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.02□□□□□ -0.16
Syne4Q8CII8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.02□□□□□ -0.16
Syne4Q8CII8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne4Q8CII8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.02□□□□□ -0.16
Syne4Q8CII8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.02□□□□□ -0.16
Syne4Q8CII8 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gm11511-201ENSMUST00000118146 540 ntBASIC14.02□□□□□ -0.17
Syne4Q8CII8 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.02□□□□□ -0.17
Syne4Q8CII8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Rprl1-201ENSMUST00000158050 327 ntBASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gm6407-201ENSMUST00000176468 549 ntBASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gm8492-201ENSMUST00000182375 987 ntBASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gm37905-201ENSMUST00000195310 341 ntBASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.02□□□□□ -0.17
Syne4Q8CII8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Syne4Q8CII8 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.01□□□□□ -0.17
Syne4Q8CII8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne4Q8CII8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms