Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Gm24526-201ENSMUST00000082921 158 ntBASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vcpip1Q8CDG3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vcpip1Q8CDG3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm12384-201ENSMUST00000119228 919 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm7399-201ENSMUST00000032395 858 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms