Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm43438-201ENSMUST00000198133 379 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm42599-201ENSMUST00000201308 469 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lrif1Q8CDD9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm12390-201ENSMUST00000117897 397 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm27847-201ENSMUST00000183711 107 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm27375-201ENSMUST00000183799 107 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 AY702102-202ENSMUST00000194651 1173 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lrif1Q8CDD9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lrif1Q8CDD9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms