Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Rft1Q8C3B8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rft1Q8C3B8 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rft1Q8C3B8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Rft1Q8C3B8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rft1Q8C3B8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rft1Q8C3B8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Daam2-202ENSMUST00000224595 1926 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm29649-201ENSMUST00000185649 419 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm7561-201ENSMUST00000211203 886 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm25857-201ENSMUST00000082788 129 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Map1b-203ENSMUST00000223725 2669 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rft1Q8C3B8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rft1Q8C3B8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms