Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp44Q8C2S0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.53□□□□□ -0.08
Usp44Q8C2S0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm14723-201ENSMUST00000118686 215 ntBASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm38266-201ENSMUST00000194931 421 ntBASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm38341-201ENSMUST00000195357 515 ntBASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp44Q8C2S0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.52□□□□□ -0.08
Usp44Q8C2S0 Gm14644-201ENSMUST00000116671 647 ntBASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Gm31256-201ENSMUST00000194705 506 ntBASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Gm9996-201ENSMUST00000070359 913 ntBASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Usp44Q8C2S0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm12015-201ENSMUST00000117065 843 ntBASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm11930-201ENSMUST00000117788 190 ntBASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm15547-201ENSMUST00000122152 333 ntBASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm37259-201ENSMUST00000193903 849 ntBASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm43179-201ENSMUST00000198797 275 ntBASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Usp44Q8C2S0 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms