Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm22711-201ENSMUST00000116890 133 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm6564-201ENSMUST00000075377 619 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Mir705-201ENSMUST00000102058 82 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm8199-201ENSMUST00000121323 823 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm21577-201ENSMUST00000190823 697 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm20802-201ENSMUST00000190832 698 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm37851-201ENSMUST00000193871 889 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm18514-201ENSMUST00000218980 436 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm25053-201ENSMUST00000103982 133 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm25922-201ENSMUST00000104281 130 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm11544-201ENSMUST00000120215 382 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm13445-201ENSMUST00000121664 307 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm24679-201ENSMUST00000158762 111 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm42937-201ENSMUST00000197360 752 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm25053-202ENSMUST00000199731 132 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Chd9Q8BYH8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm13192-201ENSMUST00000101199 208 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm10443-201ENSMUST00000119024 210 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm27530-201ENSMUST00000184096 98 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm20568-201ENSMUST00000197129 208 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.66□□□□□ -0.86
Chd9Q8BYH8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms