Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smco3Q8BQM7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Rgr-203ENSMUST00000225070 4704 ntBASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Gm11524-201ENSMUST00000119349 807 ntBASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Gm26464-201ENSMUST00000157094 305 ntBASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Gm22175-201ENSMUST00000175007 78 ntBASIC10.24□□□□□ -0.77
Smco3Q8BQM7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco3Q8BQM7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms