Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim6Q8BGE7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Gm12928-201ENSMUST00000117115 573 ntBASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Gm28196-201ENSMUST00000187719 640 ntBASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.22□□□□□ -0.29
Trim6Q8BGE7 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.22□□□□□ -0.29
Trim6Q8BGE7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim6Q8BGE7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Gm2495-201ENSMUST00000191160 466 ntBASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim6Q8BGE7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.21□□□□□ -0.29
Trim6Q8BGE7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim6Q8BGE7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim6Q8BGE7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim6Q8BGE7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim6Q8BGE7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim6Q8BGE7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim6Q8BGE7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gm6754-201ENSMUST00000117124 913 ntBASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gm12859-201ENSMUST00000117834 427 ntBASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gm14704-201ENSMUST00000120300 874 ntBASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Gm44882-201ENSMUST00000205702 802 ntBASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim6Q8BGE7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms