Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm23363-201ENSMUST00000175024 79 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sox21Q811W0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sox21Q811W0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.22□□□□□ -0.77
Sox21Q811W0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sox21Q811W0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm24830-201ENSMUST00000102024 166 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.21□□□□□ -0.77
Sox21Q811W0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm25890-201ENSMUST00000177643 165 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm22614-201ENSMUST00000178300 165 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm16505-201ENSMUST00000179981 232 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Mir7070-201ENSMUST00000183657 86 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm45186-201ENSMUST00000206874 478 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.21□□□□□ -0.77
Sox21Q811W0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm22042-201ENSMUST00000082989 165 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm26232-201ENSMUST00000083360 166 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm24136-201ENSMUST00000083374 165 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Gm26110-201ENSMUST00000083971 165 ntBASIC10.21□□□□□ -0.77
Sox21Q811W0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.21□□□□□ -0.78
Sox21Q811W0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.21□□□□□ -0.78
Sox21Q811W0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Sox21Q811W0 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.21□□□□□ -0.78
Sox21Q811W0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox21Q811W0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms