Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ubp1Q811S7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.32□□□□□ -0.44
Ubp1Q811S7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Gm11964-201ENSMUST00000120982 444 ntBASIC12.32□□□□□ -0.44
Ubp1Q811S7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Gm37489-201ENSMUST00000191883 159 ntBASIC12.32□□□□□ -0.44
Ubp1Q811S7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Gm43377-201ENSMUST00000201640 455 ntBASIC12.32□□□□□ -0.44
Ubp1Q811S7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ubp1Q811S7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubp1Q811S7 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.32□□□□□ -0.44
Ubp1Q811S7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm10434-201ENSMUST00000101158 471 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm15074-201ENSMUST00000117603 936 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm4986-201ENSMUST00000119731 549 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm13786-201ENSMUST00000122371 333 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms