Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.25□□□□□ -0.45
Pcdh19Q80TF3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdh19Q80TF3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm12997-201ENSMUST00000120207 640 ntBASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Rprl1-202ENSMUST00000198476 238 ntBASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms