Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.59□□□□□ -0.55
Pif1Q80SX8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.59□□□□□ -0.55
Pif1Q80SX8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.59□□□□□ -0.55
Pif1Q80SX8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.59□□□□□ -0.55
Pif1Q80SX8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.55
Pif1Q80SX8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Pif1Q80SX8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pif1Q80SX8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pif1Q80SX8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.58□□□□□ -0.56
Pif1Q80SX8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.58□□□□□ -0.56
Pif1Q80SX8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.58□□□□□ -0.56
Pif1Q80SX8 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Gm38123-201ENSMUST00000194990 2779 ntBASIC11.58□□□□□ -0.56
Pif1Q80SX8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 M1ap-201ENSMUST00000113980 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.58□□□□□ -0.56
Pif1Q80SX8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pif1Q80SX8 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms