Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg5Q71M36 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg5Q71M36 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg5Q71M36 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cspg5Q71M36 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.95□□□□□ -0.34
Cspg5Q71M36 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Gm7857-201ENSMUST00000117957 358 ntBASIC12.95□□□□□ -0.34
Cspg5Q71M36 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.95□□□□□ -0.34
Cspg5Q71M36 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.95□□□□□ -0.34
Cspg5Q71M36 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.95□□□□□ -0.34
Cspg5Q71M36 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.95□□□□□ -0.34
Cspg5Q71M36 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cspg5Q71M36 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.94□□□□□ -0.34
Cspg5Q71M36 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Gm11930-201ENSMUST00000117788 190 ntBASIC12.94□□□□□ -0.34
Cspg5Q71M36 Gm13665-201ENSMUST00000120830 528 ntBASIC12.94□□□□□ -0.34
Cspg5Q71M36 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.94□□□□□ -0.34
Cspg5Q71M36 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.94□□□□□ -0.34
Cspg5Q71M36 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cspg5Q71M36 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.93□□□□□ -0.34
Cspg5Q71M36 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.93□□□□□ -0.34
Cspg5Q71M36 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.93□□□□□ -0.34
Cspg5Q71M36 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cspg5Q71M36 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms