Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm12857-201ENSMUST00000117678 592 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm23045-201ENSMUST00000175041 96 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm44814-201ENSMUST00000207018 434 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Mir326-201ENSMUST00000083637 95 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.53□□□□□ -0.72
Rif1Q6PR54 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rif1Q6PR54 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Rif1Q6PR54 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rif1Q6PR54 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rif1Q6PR54 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Rif1Q6PR54 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rif1Q6PR54 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.52□□□□□ -0.72
Rif1Q6PR54 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Rif1Q6PR54 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm17944-201ENSMUST00000186351 643 ntBASIC10.52□□□□□ -0.73
Rif1Q6PR54 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm37197-201ENSMUST00000195607 401 ntBASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm4157-201ENSMUST00000211647 679 ntBASIC10.52□□□□□ -0.73
Rif1Q6PR54 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm38102-201ENSMUST00000192791 1935 ntBASIC10.52□□□□□ -0.73
Rif1Q6PR54 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Gm18514-201ENSMUST00000218980 436 ntBASIC10.52□□□□□ -0.73
Rif1Q6PR54 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rif1Q6PR54 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms