Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Gm45930-201ENSMUST00000221330 292 ntBASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rad54bQ6PFE3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rad54bQ6PFE3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Gm7561-201ENSMUST00000211203 886 ntBASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rad54bQ6PFE3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Gm27847-201ENSMUST00000183711 107 ntBASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Gm27375-201ENSMUST00000183799 107 ntBASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.51□□□□□ -0.41
Rad54bQ6PFE3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms