Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Irf4Q64287 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Irf4Q64287 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.22□□□□□ -0.45
Irf4Q64287 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.22□□□□□ -0.45
Irf4Q64287 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.22□□□□□ -0.45
Irf4Q64287 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.22□□□□□ -0.45
Irf4Q64287 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.22□□□□□ -0.45
Irf4Q64287 Gm14017-201ENSMUST00000121934 386 ntBASIC12.22□□□□□ -0.45
Irf4Q64287 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.22□□□□□ -0.45
Irf4Q64287 Gm23119-201ENSMUST00000158610 140 ntBASIC12.22□□□□□ -0.45
Irf4Q64287 Rprl1-202ENSMUST00000198476 238 ntBASIC12.22□□□□□ -0.45
Irf4Q64287 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Irf4Q64287 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Irf4Q64287 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Irf4Q64287 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.22□□□□□ -0.45
Irf4Q64287 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Irf4Q64287 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Irf4Q64287 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Irf4Q64287 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Irf4Q64287 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.21□□□□□ -0.45
Irf4Q64287 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Irf4Q64287 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.21□□□□□ -0.45
Irf4Q64287 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm12015-201ENSMUST00000117065 843 ntBASIC12.21□□□□□ -0.45
Irf4Q64287 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.21□□□□□ -0.45
Irf4Q64287 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm2260-201ENSMUST00000184965 657 ntBASIC12.21□□□□□ -0.45
Irf4Q64287 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Gm44958-201ENSMUST00000203734 736 ntBASIC12.21□□□□□ -0.45
Irf4Q64287 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Irf4Q64287 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Irf4Q64287 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Irf4Q64287 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Irf4Q64287 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Irf4Q64287 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Irf4Q64287 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Irf4Q64287 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Irf4Q64287 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Irf4Q64287 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Irf4Q64287 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Irf4Q64287 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Irf4Q64287 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Irf4Q64287 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Irf4Q64287 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Irf4Q64287 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Irf4Q64287 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Irf4Q64287 Gm24934-201ENSMUST00000103764 111 ntBASIC12.2□□□□□ -0.46
Irf4Q64287 Gm13296-201ENSMUST00000117854 997 ntBASIC12.2□□□□□ -0.46
Irf4Q64287 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.2□□□□□ -0.46
Irf4Q64287 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms