Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.15□□□□□ -0.46
Vsx2Q61412 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.15□□□□□ -0.46
Vsx2Q61412 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Vsx2Q61412 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.15□□□□□ -0.47
Vsx2Q61412 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Vsx2Q61412 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Vsx2Q61412 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.14□□□□□ -0.47
Vsx2Q61412 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.14□□□□□ -0.47
Vsx2Q61412 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.14□□□□□ -0.47
Vsx2Q61412 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.14□□□□□ -0.47
Vsx2Q61412 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Vsx2Q61412 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm10608-202ENSMUST00000213924 676 ntBASIC12.14□□□□□ -0.47
Vsx2Q61412 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.14□□□□□ -0.47
Vsx2Q61412 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.14□□□□□ -0.47
Vsx2Q61412 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Vsx2Q61412 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.13□□□□□ -0.47
Vsx2Q61412 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.13□□□□□ -0.47
Vsx2Q61412 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Gm27516-201ENSMUST00000184237 98 ntBASIC12.13□□□□□ -0.47
Vsx2Q61412 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.13□□□□□ -0.47
Vsx2Q61412 Gm5904-201ENSMUST00000210286 865 ntBASIC12.13□□□□□ -0.47
Vsx2Q61412 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Gm18935-201ENSMUST00000212692 664 ntBASIC12.13□□□□□ -0.47
Vsx2Q61412 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vsx2Q61412 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vsx2Q61412 Olfr582-201ENSMUST00000098212 960 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms