Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a4Q60857 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc6a4Q60857 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Gm11439-201ENSMUST00000118598 409 ntBASIC12.73□□□□□ -0.37
Slc6a4Q60857 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Gm32999-201ENSMUST00000192693 562 ntBASIC12.73□□□□□ -0.37
Slc6a4Q60857 Gm19187-201ENSMUST00000206781 892 ntBASIC12.73□□□□□ -0.37
Slc6a4Q60857 Gm18212-201ENSMUST00000211678 889 ntBASIC12.73□□□□□ -0.37
Slc6a4Q60857 Gm5363-201ENSMUST00000211927 938 ntBASIC12.73□□□□□ -0.37
Slc6a4Q60857 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc6a4Q60857 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.72□□□□□ -0.37
Slc6a4Q60857 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Gm18827-201ENSMUST00000188341 790 ntBASIC12.72□□□□□ -0.37
Slc6a4Q60857 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Gm7003-201ENSMUST00000195089 312 ntBASIC12.72□□□□□ -0.37
Slc6a4Q60857 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.72□□□□□ -0.37
Slc6a4Q60857 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc6a4Q60857 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Gm14028-201ENSMUST00000117434 479 ntBASIC12.71□□□□□ -0.37
Slc6a4Q60857 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc6a4Q60857 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms