Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm13744-201ENSMUST00000118953 850 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm15824-201ENSMUST00000119516 955 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm29664-201ENSMUST00000191125 463 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm37676-201ENSMUST00000195496 507 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm42619-201ENSMUST00000197564 1136 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Gm17838-201ENSMUST00000205872 876 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.17□□□□□ -0.3
Foxd4Q60688 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Foxd4Q60688 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Foxd4Q60688 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Foxd4Q60688 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Foxd4Q60688 Cog3-203ENSMUST00000227473 4197 ntBASIC13.17□□□□□ -0.3
Foxd4Q60688 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm37960-201ENSMUST00000192402 1897 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm5354-201ENSMUST00000182417 973 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm28941-201ENSMUST00000185536 1017 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm18348-201ENSMUST00000191227 820 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm42591-201ENSMUST00000197249 700 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm6590-201ENSMUST00000203343 687 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 AC116589.9-201ENSMUST00000221462 908 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Gm26315-201ENSMUST00000083890 321 ntBASIC13.16□□□□□ -0.3
Foxd4Q60688 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.16□□□□□ -0.3
Foxd4Q60688 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Foxd4Q60688 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Foxd4Q60688 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxd4Q60688 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxd4Q60688 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxd4Q60688 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Foxd4Q60688 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms