Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm7809-201ENSMUST00000153199 742 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm8738-201ENSMUST00000172606 329 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm13226-201ENSMUST00000117838 404 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm14660-201ENSMUST00000119809 575 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm11964-201ENSMUST00000120982 444 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm45784-201ENSMUST00000188360 142 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm22058-201ENSMUST00000083393 310 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5d-4Q5R1F6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav5d-4Q5R1F6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms