Protein–RNA interactions for Protein: Q3UWQ3

Ube2fb, NEDD8-conjugating enzyme UBE2F-B, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fbQ3UWQ3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ube2fbQ3UWQ3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm14130-201ENSMUST00000118417 987 ntBASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm13097-201ENSMUST00000210722 397 ntBASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ube2fbQ3UWQ3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ube2fbQ3UWQ3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ube2fbQ3UWQ3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ube2fbQ3UWQ3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ube2fbQ3UWQ3 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ube2fbQ3UWQ3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ube2fbQ3UWQ3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms