Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cks1brtQ3UNC9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm44094-201ENSMUST00000204703 2030 ntBASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm15460-201ENSMUST00000118147 391 ntBASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm27459-201ENSMUST00000184860 107 ntBASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
Cks1brtQ3UNC9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Cks1brtQ3UNC9 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Cks1brtQ3UNC9 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.9□□□□□ -0.99
Cks1brtQ3UNC9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cks1brtQ3UNC9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cks1brtQ3UNC9 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
Cks1brtQ3UNC9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Cks1brtQ3UNC9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Gm19040-201ENSMUST00000203280 4726 ntBASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Gm4804-201ENSMUST00000182234 999 ntBASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Gm44985-201ENSMUST00000206202 1016 ntBASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 AC154572.2-201ENSMUST00000225105 997 ntBASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.89□□□□□ -0.99
Cks1brtQ3UNC9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms