Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ush2AQ2QI47 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 AC166359.1-201ENSMUST00000220243 1871 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Mir453-201ENSMUST00000104732 82 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 AC241616.1-201ENSMUST00000213741 166 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 AC159196.1-201ENSMUST00000225524 377 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm44540-201ENSMUST00000205640 354 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm6378-201ENSMUST00000084199 444 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm6441-201ENSMUST00000120983 696 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm13284-201ENSMUST00000121020 547 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm21631-201ENSMUST00000195041 754 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm8873-201ENSMUST00000217847 1439 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm24066-201ENSMUST00000104515 131 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm42751-201ENSMUST00000198065 559 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm17836-201ENSMUST00000191976 1302 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 CT025610.1-201ENSMUST00000224552 1786 ntBASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Ush2AQ2QI47 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Gm5053-201ENSMUST00000208361 1678 ntBASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ush2AQ2QI47 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms