Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.35□□□□□ -0.75
Tff1Q08423 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Tff1Q08423 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Gm14704-201ENSMUST00000120300 874 ntBASIC10.35□□□□□ -0.75
Tff1Q08423 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.35□□□□□ -0.75
Tff1Q08423 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.35□□□□□ -0.75
Tff1Q08423 Gm38241-201ENSMUST00000192641 898 ntBASIC10.35□□□□□ -0.75
Tff1Q08423 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Gm18473-201ENSMUST00000220543 868 ntBASIC10.35□□□□□ -0.75
Tff1Q08423 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.35□□□□□ -0.75
Tff1Q08423 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Tff1Q08423 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Tff1Q08423 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.35□□□□□ -0.75
Tff1Q08423 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Paupar-201ENSMUST00000194826 3482 ntBASIC10.35□□□□□ -0.75
Tff1Q08423 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tff1Q08423 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Tff1Q08423 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.34□□□□□ -0.75
Tff1Q08423 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.34□□□□□ -0.75
Tff1Q08423 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Tff1Q08423 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 479.5 ms