Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf1Q07802 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.65□□□□□ -0.38
Ebf1Q07802 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.65□□□□□ -0.39
Ebf1Q07802 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm13296-201ENSMUST00000117854 997 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf1Q07802 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ebf1Q07802 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Rprl1-202ENSMUST00000198476 238 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.64□□□□□ -0.39
Ebf1Q07802 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.64□□□□□ -0.39
Ebf1Q07802 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm10312-201ENSMUST00000078515 489 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf1Q07802 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.64□□□□□ -0.39
Ebf1Q07802 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf1Q07802 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Gm13461-201ENSMUST00000120980 662 ntBASIC12.63□□□□□ -0.39
Ebf1Q07802 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Ebf1Q07802 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.63□□□□□ -0.39
Ebf1Q07802 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Gm8913-201ENSMUST00000209491 641 ntBASIC12.63□□□□□ -0.39
Ebf1Q07802 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.63□□□□□ -0.39
Ebf1Q07802 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.63□□□□□ -0.39
Ebf1Q07802 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ebf1Q07802 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ebf1Q07802 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms