Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sox9Q04887 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sox9Q04887 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.86□□□□□ -0.35
Sox9Q04887 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.86□□□□□ -0.35
Sox9Q04887 Gm14219-201ENSMUST00000120414 288 ntBASIC12.86□□□□□ -0.35
Sox9Q04887 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Gm6485-201ENSMUST00000160676 439 ntBASIC12.86□□□□□ -0.35
Sox9Q04887 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Gm37299-201ENSMUST00000193951 826 ntBASIC12.86□□□□□ -0.35
Sox9Q04887 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sox9Q04887 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sox9Q04887 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.86□□□□□ -0.35
Sox9Q04887 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sox9Q04887 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sox9Q04887 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox9Q04887 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sox9Q04887 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sox9Q04887 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox9Q04887 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox9Q04887 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Sox9Q04887 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Sox9Q04887 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox9Q04887 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox9Q04887 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox9Q04887 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox9Q04887 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox9Q04887 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.85□□□□□ -0.35
Sox9Q04887 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox9Q04887 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.84□□□□□ -0.35
Sox9Q04887 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox9Q04887 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox9Q04887 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms