Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabpb1Q00420 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gm9083-201ENSMUST00000120423 819 ntBASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Snora78-201ENSMUST00000158630 128 ntBASIC12.63□□□□□ -0.39
Gabpb1Q00420 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gm44958-201ENSMUST00000203734 736 ntBASIC12.63□□□□□ -0.39
Gabpb1Q00420 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.63□□□□□ -0.39
Gabpb1Q00420 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.63□□□□□ -0.39
Gabpb1Q00420 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gm10076-201ENSMUST00000073238 384 ntBASIC12.63□□□□□ -0.39
Gabpb1Q00420 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabpb1Q00420 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.62□□□□□ -0.39
Gabpb1Q00420 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.62□□□□□ -0.39
Gabpb1Q00420 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm42599-201ENSMUST00000201308 469 ntBASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.62□□□□□ -0.39
Gabpb1Q00420 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.62□□□□□ -0.39
Gabpb1Q00420 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.62□□□□□ -0.39
Gabpb1Q00420 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.62□□□□□ -0.39
Gabpb1Q00420 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gabpb1Q00420 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms