Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim43cP86449 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim43cP86449 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.53□□□□□ -0.24
Trim43cP86449 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.53□□□□□ -0.24
Trim43cP86449 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Trim43cP86449 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.53□□□□□ -0.24
Trim43cP86449 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim43cP86449 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trim43cP86449 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.53□□□□□ -0.24
Trim43cP86449 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim43cP86449 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.53□□□□□ -0.24
Trim43cP86449 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim43cP86449 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim43cP86449 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.53□□□□□ -0.24
Trim43cP86449 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.53□□□□□ -0.24
Trim43cP86449 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trim43cP86449 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trim43cP86449 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim43cP86449 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm10434-201ENSMUST00000101158 471 ntBASIC13.52□□□□□ -0.25
Trim43cP86449 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm14832-201ENSMUST00000121289 322 ntBASIC13.52□□□□□ -0.25
Trim43cP86449 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim43cP86449 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim43cP86449 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm37201-201ENSMUST00000191845 523 ntBASIC13.52□□□□□ -0.25
Trim43cP86449 Gm44882-201ENSMUST00000205702 802 ntBASIC13.52□□□□□ -0.25
Trim43cP86449 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.52□□□□□ -0.25
Trim43cP86449 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim43cP86449 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim43cP86449 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.52□□□□□ -0.25
Trim43cP86449 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim43cP86449 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim43cP86449 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Trim43cP86449 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Trim43cP86449 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim43cP86449 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43cP86449 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43cP86449 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43cP86449 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim43cP86449 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Gm15370-201ENSMUST00000117158 253 ntBASIC13.51□□□□□ -0.25
Trim43cP86449 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim43cP86449 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim43cP86449 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim43cP86449 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim43cP86449 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms