Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CiitaP79621 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CiitaP79621 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CiitaP79621 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CiitaP79621 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CiitaP79621 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CiitaP79621 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CiitaP79621 Gm14208-201ENSMUST00000119645 678 ntBASIC13.47□□□□□ -0.25
CiitaP79621 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.47□□□□□ -0.25
CiitaP79621 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Gm16505-201ENSMUST00000179981 232 ntBASIC13.47□□□□□ -0.25
CiitaP79621 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Gm37666-201ENSMUST00000194110 866 ntBASIC13.47□□□□□ -0.25
CiitaP79621 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.47□□□□□ -0.25
CiitaP79621 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.47□□□□□ -0.25
CiitaP79621 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.47□□□□□ -0.25
CiitaP79621 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.47□□□□□ -0.25
CiitaP79621 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.47□□□□□ -0.25
CiitaP79621 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CiitaP79621 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CiitaP79621 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
CiitaP79621 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Gm9630-201ENSMUST00000178304 885 ntBASIC13.46□□□□□ -0.25
CiitaP79621 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Gm7003-201ENSMUST00000195089 312 ntBASIC13.46□□□□□ -0.25
CiitaP79621 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.46□□□□□ -0.25
CiitaP79621 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.46□□□□□ -0.25
CiitaP79621 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CiitaP79621 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CiitaP79621 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CiitaP79621 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CiitaP79621 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
CiitaP79621 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
CiitaP79621 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CiitaP79621 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms